The Amissense Tool analyzes and visualizes AlphaMissense pathogenicity scores, integrating AlphaFold structures and ClinVar data. It offers automated pipelines, visualizations, and versatile command-line utilities.
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Feat: Generate session for Chimera/PyMOL to open the PDB file and color according to B-factors #44
Description:
Enhance usability by generating session files that can be opened in molecular visualization tools like Chimera or PyMOL. These session files should include B-factor-based coloring, making it easier for users to visualize the structure directly in these tools.
Expected Behavior:
Generate session files for Chimera, PyMOL, or other supported molecular visualization tools.
Ensure that B-factor-based coloring is applied in these session files.
Proposed Solution:
Integrate session file generation into the pipeline for Chimera and PyMOL.
Document the usage for opening the session files and visualizing the structures.
berntpopp
commented
3 months ago
Description: Enhance usability by generating session files that can be opened in molecular visualization tools like Chimera or PyMOL. These session files should include B-factor-based coloring, making it easier for users to visualize the structure directly in these tools.
Expected Behavior:
Proposed Solution: