hall-lab / speedseq

A flexible framework for rapid genome analysis and interpretation
MIT License
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error with vep_cache #122

Open yaruchen opened 6 years ago

yaruchen commented 6 years ago

Hi, I have some problem when i run "perl ensembl-tools-release-76/scripts/variant_effect_predictor/INSTALL.pl -c speedseq/annotations/vep_cache -a ac -s homo_sapiens -y GRCh37" , there is the problem: Using HTTP::Tiny - this may fail when downloading large files; install LWP::Simple to avoid this issue

Hello! This installer is configured to install v76 of the Ensembl API for use by the VEP. It will not affect any existing installations of the Ensembl API that you may have.

It will also download and install cache files from Ensembl's FTP server.

Checking for installed versions of the Ensembl API...done

Setting up directories

Downloading required files