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hall-lab / speedseq

A flexible framework for rapid genome analysis and interpretation
MIT License
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samtools compilation #127

Open ccario83 opened 6 years ago

ccario83 commented 6 years ago

There is a possible issue on RedHat 6.6 (or related OSes) with the ncurses library when building samtools. Since speedseq's build is unlikely to ever need the curses library, its probably safe to not use it:

Makefile

samtools:
    cd $(SAMTOOLS_DIR) && ./configure --without-curses
        $(MAKE) -C $(SAMTOOLS_DIR)