speedseq var and sv only on genomic regions

hall-lab / speedseq

A flexible framework for rapid genome analysis and interpretation

MIT License

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speedseq var and sv only on genomic regions #140

Open d-kk opened 4 years ago

d-kk commented 4 years ago

Is it possible to run speedseq var and sv only on specified genomic regions?

we are interested in looking at variations only in certain regions of interest and being able to analyses only specific regions would make our analysis much faster.

Thanks for any help