Are CRAM files supported by SpeedSeq?

hall-lab / speedseq

A flexible framework for rapid genome analysis and interpretation

MIT License

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Are CRAM files supported by SpeedSeq? #154

Open sandrine-cmf opened 1 year ago

sandrine-cmf commented 1 year ago

Hi I just wanted to know whether CRAM files were also supported by SpeedSeq as input files? If so, do I require any special arguments when running the codes? Thanks!