Open mthang opened 6 years ago
Hi I encountered a failure message while running "MetaPathway".
This execute command generated "failure" message.
EXECUTED COMMAND : ~/metapathways2-master/libs/python_scripts/MetaPathways_create_genbank.py -g ~/test/output/S1/genbank//S1.annot.gff -n ~/metapathways/test/output/S1/preprocessed/S1.fasta -p ~/metapathways/test/output/S1/orf_prediction/S1.qced.faa --out-ptinput ~/metapathways/test/output/S1/ptools/
After I had a closer look at the bug, I found that there is no option "--out-ptinput" in this python script MetaPathways_create_genbank.py. Also, an output filename is missing from the execute command above.
is this a bug ?
Many thanks,
Hi I encountered a failure message while running "MetaPathway".
This execute command generated "failure" message.
EXECUTED COMMAND : ~/metapathways2-master/libs/python_scripts/MetaPathways_create_genbank.py -g ~/test/output/S1/genbank//S1.annot.gff -n ~/metapathways/test/output/S1/preprocessed/S1.fasta -p ~/metapathways/test/output/S1/orf_prediction/S1.qced.faa
--out-ptinput ~/metapathways/test/output/S1/ptools/
After I had a closer look at the bug, I found that there is no option "--out-ptinput" in this python script MetaPathways_create_genbank.py. Also, an output filename is missing from the execute command above.
is this a bug ?
Many thanks,