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hammerlab / biokepi

Bioinformatics Ketrew Pipelines
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Biokepi dbsnp download fails #469

Closed julia326 closed 7 years ago

julia326 commented 7 years ago

The wget-dbsnp.vcf.gz task fails with:

--2017-05-17 23:40:20--  ftp://gsapubftp-anonymous@ftp.broadinstitute.org/bundle/2.8/b37/dbsnp_138.b37.vcf.gz
           => '/mnt/fuzzy-nfs/nfs-pool/biokepi-work-dir/reference-genome/b37decoy/dbsnp.vcf.gz'
Resolving ftp.broadinstitute.org (ftp.broadinstitute.org)... 69.173.80.251
Connecting to ftp.broadinstitute.org (ftp.broadinstitute.org)|69.173.80.251|:21... connected.
Logging in as gsapubftp-anonymous ... Logged in!
==> SYST ... done.    ==> PWD ... done.
==> TYPE I ... done.  ==> CWD (1) /bundle/2.8/b37 ... 
No such directory 'bundle/2.8/b37'.