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hammerlab / biokepi

Bioinformatics Ketrew Pipelines
Apache License 2.0
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`bam_left_align`'s `~reference_build` argument? #477

Open smondet opened 7 years ago

smondet commented 7 years ago

Why don't we get the ref-build from the bam itself?

https://github.com/hammerlab/biokepi/blob/b0a44be0dba52b27c2793aa5ba2cd29c3351204f/src/pipeline_edsl/to_workflow.ml#L976

smondet commented 7 years ago

From here: https://github.com/hammerlab/biokepi/pull/391 CC @ihodes (?)

ihodes commented 7 years ago

Seems like it should be an optional arg... whoops!