Closed jburos closed 7 years ago
building off earlier PRs, this PR adds support for a categorical variable in plot_survival.
plot_survival
Now, if two groups are provided, the result is plotted as if it were a float (cut at median or threshold) or boolean value:
If the value contains data for more than 2 groups, a CoxPH model is fit & survival curves for each group are plotted:
Oops realize now I need to cherry pick these commits to avoid the warn-on-vcf-error hack
Coverage decreased (-3.4%) to 53.533% when pulling 991d4b77e4c9d1cfeae62b38549de4fb76589068 on feature-plot-by-category into 31545c4b03d9a1edd9cc543ac1f863a140e88cd8 on master.
building off earlier PRs, this PR adds support for a categorical variable in
plot_survival
.Now, if two groups are provided, the result is plotted as if it were a float (cut at median or threshold) or boolean value:
If the value contains data for more than 2 groups, a CoxPH model is fit & survival curves for each group are plotted:![screen shot 2017-07-06 at 8 13 03 pm](https://user-images.githubusercontent.com/923453/27937773-913d4ffa-6287-11e7-9ec1-e8c53a6c567e.png)