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hammerlab / cohorts

Utilities for analyzing mutations and neoepitopes in patient cohorts
Apache License 2.0
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Update README & documentation to match current usage #234

Open jburos opened 7 years ago

jburos commented 7 years ago

Certain parts of readme & other documentation are out of date.

  1. [ ] Notably, the README contains references to snv_vcf_paths=, which should now be variants=.
  2. [ ] The quick-start notebooks at hammerlab/tcga-blca is another example

This will help other folks get up to speed on cohorts usage more quickly.