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hammerlab / ngsdiagnostics

Diagnostic Scripts for an NGS Pipeline
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Landing page for NGS Diagnostics #16

Open nealsid opened 10 years ago

nealsid commented 10 years ago

There'll probably be two main scenarios for someone visiting the diagnostics dashboard

-Analysis for validation runs - probably care more about aggregate data over runs on well-known data sets across both GATK and ADAM

-Analysis for clinical runs - specific runs on a particular sample, differences in variant calls and annotations for GATK and ADAM runs

The landing page we'd been working on picked some defaults for aggregating time data for all the runs that were in the database. For someone who wanted a more specific view, I implemented a landing page at /start that suggests completions based on properties of the run: sample name, exome vs. genome, or any component of the filename( which actually may be too broad)

hammer commented 10 years ago

Great idea. We definitely need a way to subset the runs we're charting. I think it would be better to make the dashboard a single page with this subsetting functionality at the top of the page. I'll whip up a sketch of what I'm thinking and post it here some time this week.