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hammerlab
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stratocumulus
DEPRECATED: we don't really maintain this any more, we use Coclobas:
https://github.com/hammerlab/coclobas
Apache License 2.0
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add `gawk` as a core dependency (for NetMHC tools)
#56
armish
opened
8 years ago
0
Increase/allow user to set size of Ketrew node
#55
ihodes
opened
8 years ago
1
Fetch stdout/stderr for jobs run on the PBS backend
#54
hammer
closed
8 years ago
1
Put emacs on the docker image
#53
hammer
closed
8 years ago
6
PBS walltime limits
#52
arahuja
opened
8 years ago
2
Fix handling of firewall rules
#51
smondet
closed
8 years ago
1
Add option to open ports on the pbs-server
#50
smondet
closed
8 years ago
0
Fix #48
#49
smondet
closed
8 years ago
1
the `.ssh/` directory the cluster-user(s) is now managed by concurrent jobs
#48
smondet
closed
8 years ago
0
A few fixes
#47
smondet
closed
8 years ago
1
More Biokepi dependencies
#46
smondet
closed
8 years ago
0
Add option to specify additional packages
#45
ihodes
closed
8 years ago
0
`gcpketrew.sh` improvements
#44
smondet
closed
8 years ago
3
Add Postgres server option
#43
ihodes
opened
8 years ago
0
Make the Ketrew Docker image configurable
#42
smondet
closed
8 years ago
0
Fix #36 and #40
#41
smondet
closed
8 years ago
1
Connection problem between compute nodes
#40
smondet
closed
8 years ago
2
Condition too weak in the node that gets `gcloudnfs`
#39
smondet
closed
8 years ago
0
add zone when converting nfs to node
#38
arahuja
closed
8 years ago
1
Fix missing dependency on user creation
#37
smondet
closed
8 years ago
0
Point people to Stratotemplate
#36
ihodes
closed
8 years ago
0
Update to Ketrew API changes
#35
smondet
closed
8 years ago
1
Avoid shell expansion of `~`
#34
smondet
closed
8 years ago
0
Make wait loops one-liners (#32)
#33
smondet
closed
8 years ago
0
All commands should be one-liners
#32
smondet
closed
8 years ago
1
Make the PBS server not a compute node
#31
smondet
closed
8 years ago
0
Add tcsh as a biokepi dependency for netmhc tools
#30
armish
closed
8 years ago
0
Improve ux
#29
smondet
closed
8 years ago
0
Make the Ketrew server optional (#27)
#28
smondet
closed
8 years ago
0
Make Ketrew server optional
#27
smondet
closed
8 years ago
0
More docker
#26
smondet
closed
8 years ago
0
Ketrew kontainer deployment
#25
smondet
closed
8 years ago
1
Fix `~host` argument for some conditions (fix #23)
#24
smondet
closed
8 years ago
0
Host not propagated through ensure conditions
#23
ihodes
closed
8 years ago
0
Suuport for new gcloudnfs implementation
#22
smondet
closed
8 years ago
0
Update to new gcloudnfs
#21
smondet
closed
8 years ago
0
Additional helpers
#20
smondet
closed
8 years ago
1
NFS deployments
#19
smondet
closed
8 years ago
1
Make Java version configurable
#18
smondet
closed
8 years ago
1
Multiple NFS servers
#17
arahuja
closed
8 years ago
3
Allow selection of Java version on compute nodes
#16
arahuja
closed
8 years ago
0
Ketrew client requires TLS
#15
arahuja
closed
8 years ago
0
DNS constant name for the Ketrew server
#14
smondet
opened
8 years ago
0
Create compute nodes without external IP address
#13
smondet
opened
8 years ago
1
Function: Deployment.t → Biokepi.Machine.t
#12
smondet
closed
8 years ago
1
Make test NFS mount witness configurable
#11
smondet
opened
8 years ago
0
Containerized build of Ketrew
#10
smondet
closed
8 years ago
1
HTTP server for results and things like IGV.xml files
#9
smondet
opened
8 years ago
3
Create cluster-user with custom SSH keys
#8
smondet
closed
8 years ago
0
Distributed filesystem
#7
smondet
opened
8 years ago
4
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