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hamrhein / mouse_embryo

Graphviz graphs using edge data from String-db
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No module named 'sql' #1

Open brianpenghe opened 4 years ago

brianpenghe commented 4 years ago

I got stuck on building the database-

File "util/build_sql_stringdb_database.py", line 5, in ModuleNotFoundError: No module named 'sql'

Which version of sql should be installed?

hamrhein commented 4 years ago

The module "sql" is in the repository root directory. In order for the utility to find it, either set the PYTHONPATH environment variable to the repo root directory, or execute it from the repo root directory as shown in the README.