haniffalab / webatlas-pipeline

A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas
MIT License
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Query with Enabling Colormap Legend in WebAtlas Scatterplot #148

Open chunhuicai opened 3 days ago

chunhuicai commented 3 days ago

Hi,

Thanks for developing this great tool! I am currently working on setting up WebAtlas to visualize our MERFISH datasets and have encountered an issue with enabling the gene expression colormap legend in the scatterplot component. I’ve noticed that all the examples on the WebAtlas website don't have this type of legend, whereas I was able to enable it when using VitessceR. I’m wondering if there is an option available in WebAtlas to enable the expression colormap legend.

WebAtlas: Screenshot 2024-11-21 at 3 03 10 PM

VitessceR (legend on the top right):

Screenshot 2024-11-21 at 3 04 20 PM

Thank you very much for your time and support!

Best, Chunhui