hansenlab / minfi

Devel repository for minfi
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Problem with minfi using getAnnotation for IlluminaHumanMethylationEPICanno.ilm10b4.hg19 #169

Closed pfransquet closed 5 years ago

pfransquet commented 5 years ago

Hi All, i have just found the new annotation file IlluminaHumanMethylationEPICanno.ilm10b4.hg19 and want to redo my annotations and rgset though minfi. However when i use:

getAnnotation (IlluminaHumanMethylationEPICanno.ilm10b4.hg19)

I just get a 502 error or R just times out. getAnnotation worked fine for the B2 annotation, which usually takes about 5 min max.

Any help i could get would greatly be appreciated, i want the most up to date data set i can get! Cheers, Pete p.s I am using R version 5.0.1, no issues loading the annotation library etc.