Describe the bug
Started training my dataset from ONT, had the following error:
To Reproduce
python chiron/utils/raw.py --input ~/Desktop/YellowFast5Pass/ --output ~/Desktop/YellowBaseCalled/ --mode dna
WARNING:tensorflow:From chiron/utils/raw.py:53: The name tf.gfile.Walk is deprecated. Please use tf.io.gfile.walk instead.
Traceback (most recent call last):
File "chiron/utils/raw.py", line 169, in
run(args)
File "chiron/utils/raw.py", line 148, in run
run_list(dirs,output_folder)
File "chiron/utils/raw.py", line 111, in run_list
extract(root_folder,output_folder)
File "chiron/utils/raw.py", line 70, in extract
total = total_errors)
TypeError: update() got an unexpected keyword argument 'title'
(base) Drs-iMac:Chiron dr.kristinafeyewaseen$
Screenshots
Provided code
Environment (please complete the following information):
Describe the bug Started training my dataset from ONT, had the following error:
To Reproduce python chiron/utils/raw.py --input ~/Desktop/YellowFast5Pass/ --output ~/Desktop/YellowBaseCalled/ --mode dna WARNING:tensorflow:From chiron/utils/raw.py:53: The name tf.gfile.Walk is deprecated. Please use tf.io.gfile.walk instead.
Traceback (most recent call last): File "chiron/utils/raw.py", line 169, in
run(args)
File "chiron/utils/raw.py", line 148, in run
run_list(dirs,output_folder)
File "chiron/utils/raw.py", line 111, in run_list
extract(root_folder,output_folder)
File "chiron/utils/raw.py", line 70, in extract
total = total_errors)
TypeError: update() got an unexpected keyword argument 'title'
(base) Drs-iMac:Chiron dr.kristinafeyewaseen$
Screenshots Provided code
Environment (please complete the following information):