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haotianteng / Chiron

A basecaller for Oxford Nanopore Technologies' sequencers
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training data format #13

Closed huangnengCSU closed 6 years ago

huangnengCSU commented 6 years ago

Hi hao, when I read the codes, I feel a little confused about ".label" format of the training data. Whether each line in the label file is the bases of the whole sequence or the kmer ? If you don't mind, can you give me an example of training data. Thank you.

mbhall88 commented 6 years ago

Hi @huangnengCSU . There is an example of what that file should look like at https://github.com/haotianteng/Chiron#training Let us know if that doesn't work for you.

huangnengCSU commented 6 years ago

thank you issue closed