haotianteng / Chiron

A basecaller for Oxford Nanopore Technologies' sequencers
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Issues in chiron_label #18

Closed mbhall88 closed 6 years ago

mbhall88 commented 6 years ago

This module has a note at the top saying it is a temporary script. Is it still temporary or not? If so should we delete it?

If we are not deleting it there are multiple bugs in the function label.

haotianteng commented 6 years ago

It is a script under development, I was trying to cooperate with Sheng Wang with cwDTW, this is a python binding for their labeling software.

2018-02-18 7:55 GMT+10:00 Michael Hall notifications@github.com:

This module has a note at the top https://github.com/haotianteng/Chiron/blob/a19c0ac0dc7f14ceadc02163293aec7c78a5ea4e/chiron/chiron_label.py#L5 saying it is a temporary script. Is it still temporary or not? If so should we delete it?

If we are not deleting it there are multiple bugs in the function label https://github.com/haotianteng/Chiron/blob/a19c0ac0dc7f14ceadc02163293aec7c78a5ea4e/chiron/chiron_label.py#L106 .

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mbhall88 commented 6 years ago

Ok. Well in that case the two issues I noted will need fixing at some point. Those links are also to the code on the clean_code branch so make sure you fix on that branch.

haotianteng commented 6 years ago

Yes, it will be put into the release version once the labeling software is tested.

Michael Hall notifications@github.com于2018年2月18日 周日19:25写道:

Ok. Well in that case the two issues I noted will need fixing at some point. Those links are also to the code on the clean_code branch so make sure you fix on that branch.

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Reply to this email directly, view it on GitHub https://github.com/haotianteng/Chiron/issues/18#issuecomment-366502943, or mute the thread https://github.com/notifications/unsubscribe-auth/AKo3XyaKxTlhXwqT2vq9we83uhPnVr7hks5tV-x1gaJpZM4SJen7 .

-- Teng Haotian University of Queensland, Queensland, Australia +61 0426116017

mbhall88 commented 6 years ago

Ok. It's probably best to keep it then.