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haotianteng / Chiron

A basecaller for Oxford Nanopore Technologies' sequencers
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Cannot basecall anything #44

Closed nmiculinic closed 6 years ago

nmiculinic commented 6 years ago

I'm trying to start Chiron, but I cannot basecall anything. I've started it with: python chiron/entry.py call -i chiron/example_data/ -o /tmp/xxx cloned from my github (( since I had to submit few fixed for it to run without exceptions )) And I get /tmp/xxx with 5 empty directories (raw, ...)

What went wrong? How can I debug it further?

nmiculinic commented 6 years ago

Found the bug...python2/3 incompatibility; fixed in the PR #43