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haotianteng / Chiron

A basecaller for Oxford Nanopore Technologies' sequencers
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Did you train a BNLSTM model? #58

Closed qianlou closed 6 years ago

qianlou commented 6 years ago

Hi, Haotian. Now the default model is based on LSTM model. Did you train a BNLSTM model? If so, can you share with me? Training a new model in 20000 steps needs so much time and when I trained a new model, it interrupted at 7340 steps maybe because of my hardware problem.

haotianteng commented 6 years ago

No I don't have a batch normalized LSTM, you can use the module to train one if you like. BNLSTM is slower than LSTM with current implementation.

haotianteng commented 6 years ago

No I don't have a batch normalized LSTM, you can use the module to train one if you like. BNLSTM is slower than LSTM with current implementation.