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haotianteng / Chiron

A basecaller for Oxford Nanopore Technologies' sequencers
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RNA model - no output #65

Closed jnaitsaada closed 5 years ago

jnaitsaada commented 6 years ago

Hi,

I tried to use Chiron with the RNA model, but all output files are empty. It works fine with the DNA model though.

I looked into the source code, and in the evaluation function, it seems that the prediction from the CTC decoder is empty. I don't know where the problem comes from. Any idea ?

Thank you

haotianteng commented 6 years ago

The RNA model is still under development, a patch will come soon.

Thank you Teng

haotianteng commented 5 years ago

A new RNA model has been updated.