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happykhan / BRIG

BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.
http://sourceforge.net/projects/brig/
GNU General Public License v3.0
26 stars 6 forks source link

empty graph generated #22

Open AudreyBfr opened 2 years ago

AudreyBfr commented 2 years ago

Hello, I have a problem running BRIG. I would like to compare 4 closed genomes but in contigs, and to plot the corresponding blast results. The process is running well without errors. And text files containing blast results are generated. And they look good. But nothing appears on the picture( DSM fna Here are the head of blast results files compressed for 1 rin head_I.fnaVsSpaced0DSM.fna.tab.txt head_Ring0merge.txt g

maricleon commented 1 year ago

Hi, were you able to solve this problem? I am currently having a similar challenge

AudreyBfr commented 1 year ago

Hello,

No I never managed to solve my problem :( Sorry

Le 08/11/2022 16:59, Leon Maric a écrit :

Hi, were you able to solve this problem? I am currently having a similar challenge

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maricleon commented 1 year ago

Maybe this would help: https://www.researchgate.net/post/Why_does_BRIG_fail_to_create_rings_for_some_of_the_genomes

Seems like you need java 1.6 (read below)