harbourlab
commented
2 years ago Hi Niu,
Regarding the scaling I would use the custom scale “-cs” option (see GitHub page). That way you can enter the same y-axis label. The “-f” option allows you to choose any colors you like.
Hope this helps! Stefan
Stefan Kurtenbach, Ph.D. Research Assistant Professor Department of Ophthalmology, Bascom Palmer Eye Institute University of Miami Miller School of Medicine Sylvester Comprehensive Cancer Center Director, ISCI Pluripotent Stem Cell Laboratory
Biomedical Research Building Room 913 1501 NW 10th Avenue, Miami, FL 33136 305-243-3892 office, 786-252-4379 cell @.**@.>
On Mar 1, 2022, at 10:01 PM, Niu Yiwei @.**@.>> wrote:
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Hi,
Thanks very much for developing this useful tool!
I am plotting four tracks for ATAC-seq and RNA-seq data with one control and one treatment each (as below).
I want to scale the RNA-seq data for control and treatment and scale the ATAC-seq for control and treatment group.
I wonder if there is any way to do this?
Also, it would be great to set different colors for these tracks, e.g. blue/red/blue/red.
Thanks in advance.
Bests, Yiwei
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Hi,
Thanks very much for developing this useful tool!
I am plotting four tracks for ATAC-seq and RNA-seq data with one control and one treatment each (as below).
I want to scale the RNA-seq data for control and treatment and scale the ATAC-seq for control and treatment group.
I wonder if there is any way to do this?
Also, it would be great to set different colors for these tracks, e.g. blue/red/blue/red.
This question may be related with issue 7
Thanks in advance.
Bests, Yiwei