k-SFS, mutation history matrix, and frequency binning---oh my!

harrispopgen / mushi

[mu]tation [s]pectrum [h]istory [i]nference

https://harrispopgen.github.io/mushi/

MIT License

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Closed wsdewitt closed 5 years ago

wsdewitt commented 5 years ago

SFS is now matrix valued, with columns corresponding to different (say, triplet) components
The mutation intensity history is similarly matrix valued now
frequency binning is implemented