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harrispopgen / mushi

[mu]tation [s]pectrum [h]istory [i]nference
https://harrispopgen.github.io/mushi/
MIT License
24 stars 6 forks source link

test-msprime.ipynb broken #30

Closed kamdh closed 4 years ago

kamdh commented 5 years ago

Barfs with:

AttributeError                            Traceback (most recent call last)
<ipython-input-8-f410a6bec1c8> in <module>
      1 # note: the factor of 2 accounts for diploidy
      2 y = 2 * dd.population_size_trajectory(np.concatenate(([0], t)))[:, population_idx]
----> 3 η = mushi.History(t, y)
      4 
      5 plt.figure(figsize=(3, 3))

AttributeError: module 'mushi' has no attribute 'History'