New release: config fail

[AlexGaithuma]

I run the config command and it fails

EnTAP --config --run-ini /data2/Alex_MulengaLab/tools/EnTAP-1.1.1/entap_run.params --entap-ini /data2/Alex_MulengaLab/tools/EnTAP-1.1.1/entap_config.ini

Parsing ini file at: /data2/Alex_MulengaLab/tools/EnTAP-1.1.1/entap_run.params
Parsing ini file at: /data2/Alex_MulengaLab/tools/EnTAP-1.1.1/entap_config.ini
ini files parsed, debug logging will continue at: entap_outfiles/debug_2024Y5M30D-10h46m46s.txt
Error code: 10

EggNOG DIAMOND database was not found at: /bin/eggnog_proteins.dmnd
The DIAMOND test run failed.

[harta55]

The important part here is the "DIAMOND test run failed". I'd make sure you are correctly pointing to the DIAMOND executable in the entap config file. Also if you look at the debug file that entap printed, you'll see why DIAMOND failed

[AlexGaithuma]

I solved it by downloading the databases. and moving them to their respective folders.

wget http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog_proteins.dmnd.gz
pigz -d -p 8 eggnog_proteins.dmnd.gz
wget https://treegenesdb.org/FTP/EnTAP/latest/databases/entap_database.db.gz 
pigz -d -p 8 entap_database.db.gz
wget https://treegenesdb.org/FTP/EnTAP/latest/databases/entap_database.bin.gz
pigz -d -p 8 entap_database.bin.gz

[harta55]

The DIAMOND check was removed for EggNOG since it was no longer needed and the error message made more descriptive if errors occur with EggNOG in configuration. Change in v1.2.0