hartwigmedical / hmftools

Various algorithms for analysing genomics data
GNU General Public License v3.0
189 stars 58 forks source link

ACTIN-151: Fix expression selection bug for unknown cohort #412

Closed jbartletthmf closed 1 year ago

jbartletthmf commented 1 year ago

The cohort isn't indicated when ingesting the isofox results but we can detect the special n/a value of -1. When this isn't provided, there is no filtering on cohort percentile so the number of genes meeting the expression thresholds is expected to be higher.