hartwigmedical / hmftools

Various algorithms for analysing genomics data
GNU General Public License v3.0
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from where can i create ensemble data direct file called ensembl_gene_data.csv, ensembl_protein_features.csv , ensembl_trans_exon_data.csv, ensembl_trans_splice_data.csv how did u create all these files #452

Closed gagank4911 closed 10 months ago

gagank4911 commented 10 months ago

i would like you to know how did u create all the files and which columns of which file is been used for what purpose and list the tools used to create the file it would be very helpful

charlesshale commented 10 months ago

These files are derived from the public Ensembl database. They are available from the public HMF resources page on GCP.

gagank4911 commented 10 months ago

my doubt has not been cleared can you please explain properly

p-priestley commented 10 months ago

The ensembl database can be downloaded from ensembl: https://asia.ensembl.org/info/data/index.html

Could you please give more details on your use case is and why you want to recreate these derived files?