harvardinformatics / snpArcher

Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
MIT License
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Add resources to rules #157

Closed tsackton closed 4 months ago

tsackton commented 4 months ago

Adds resources to define memory for a few rules that are otherwise missing resources statements to hopefully avoid the current issue where the inferred defaults are massively to big and cause jobs to fail, e.g. #153, #148.

Might be a better way to do this in the future as we move to a different way to support slurm, but for now hopefully this will fix problems.