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harvardinformatics / snpArcher

Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
MIT License
66 stars 31 forks source link

Restarting the workflow #213

Closed austinchipps closed 1 month ago

austinchipps commented 1 month ago

Question: if I get an out of memory or time limit error that causes the workflow to quit, will restarting the job with different config.yaml parameters resume at certain checkpoints?

Thank you!

cademirch commented 1 month ago

Hi @austinchipps,

Yes, the workflow will resume from wherever it failed.

Cade