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harvardinformatics / snpArcher

Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
MIT License
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Update qc.yml #76

Closed erikenbody closed 1 year ago

erikenbody commented 1 year ago

QC test errors 

Quitting from lines 340-391 (qc_dashboard_interactive.Rmd)  Error in `stat_tree()`:
! Problem while converting geom to grob.
ℹ Error occurred in the 1st layer.
Caused by error in `check.length()`:
! 'gpar' element 'lwd' must not be length 0

Is due to ggplot2 3.4.0 update has a bug. Solving by explicitly defining ggplot 3.3.5 in qc plots. Apparently tidyverse=1.3.1 is not sufficient for version control