Closed mbhall88 closed 2 years ago
Hi @mbhall88
This feature is being already implemented (we ourselves wanted this requirement while converting some of our archive data). The implementation is here https://github.com/hasindu2008/slow5tools/pull/51 but have not yet been tested thoroughly. Will be merged to the dev branch soon after a test.
Regards
This feature for f2s is available in the master branch. Give it a go and let us know your thoughts.
Seems to be working based on a test I just ran 🎉
Hi,
Would it be possible to add a feature to allow for maintaining directory structure when converting between slow5 and fast5?
For example, if I have a directory structure
it would be nice if I could have the output directory mirror this.
For example, if I run
Then all of the fast5 files are dumped in
out/
. I would be great to have an option to have them dumped in the same nested structure as the input directory.Thanks for the great tool!