search

hassonlab / 247-encoding

Contains python scripts for performing encoding on 247 data.
0 stars 9 forks source link

Processing subject with significant electrode list #51

Closed VeritasJoker closed 1 year ago

VeritasJoker commented 1 year ago

Potentially another bug caused by pickle hierarchy: the new 777_electrode_name.pkl loads the subject column as 'object' and not 'int' so when merging with significant electrode list here causes issues.

Should be fixed by adding this df["subject"] = df.subject.astype(int) but not sure so putting it here

@leoniekerken is testing it out currently.

leoniekerken commented 1 year ago

The problem was caused because of a workaround that I incorrectly used for the copy-embedding command. After copying the files the correct way (only the embeddings), it worked.

VeritasJoker commented 1 year ago

Oh ok. @leoniekerken Can you test encoding without this line df["subject"] = df.subject.astype(int) and see if it still works? If it does work then we close this issue. If not we will add this line for the next codebase meeting. Thanks!

leoniekerken commented 1 year ago

Yes, it works without this line. Thanks for your help!