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hassonlab / 247-pickling

Contains code to create pickles from raw/processed data
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creating environment from requirements.yml failed #78

Closed hvgazula closed 1 year ago

hvgazula commented 2 years ago

found this while working with @zkokaja

hvgazula commented 2 years ago

remove all torch related lines in yml file and then install them later.

hvgazula commented 2 years ago

@hvgazula Create a make target with 1. pip install -f reks.txt and 2. pip install pytorch

zkokaja commented 1 year ago

Use Harsha's environment. @hvgazula find a way to update everyone when you change the environment

hvgazula commented 1 year ago

https://github.com/hassonlab/247-main/issues/15#issuecomment-1190537359

fix: https://stackoverflow.com/questions/2477117/pip-requirements-txt-with-alternative-index

hvgazula commented 1 year ago

I didn't really find a way to track virtual environment transactions (like conda history). Probably, the onus is on each of us to run pip list. But otherwise, sharing one person's env (with no install rights) sort of automatically forces the maintainer to ensure the environment is intact.