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hatzakislab / DeepFRET-GUI

GNU General Public License v3.0
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Predict tool with real data gives confidence <35% #8

Closed shiekh-phy closed 4 years ago

shiekh-phy commented 4 years ago

With predict trace tool, I always get a confidence level of <35%. Does this mean the data is too noisy or some issues with the program.

eembees commented 4 years ago

The predict trace tool depends largely on what model you're using (they're placed in src/main/resources/base ), which are tailored to the thermodynamics of the system we've simulated (more info on that is in our relevant publication ). If you want to train your own models on your own simulated data, you can use the code found at this repository to simulate data and train models that better represent your system.
Hope this helps!