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hci-unihd / antibodies-analysis-issues

Issue tracker for problems in the antibodies analysis workflow.
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Image out of focus - PlateK21rep1_20200506_132517_049 - A01-0000 #70

Open wolny opened 4 years ago

wolny commented 4 years ago

{"plateName":"PlateK21rep1_20200506_132517_049","siteName":"A01-0000","pixelLocation":[526.5454545454545,498.18181818181824,0.0],"analysisVersion":"?"}

Sample out of focus image in the top left and bottom right regions. Our segmentation pipeline still performs decently for those, but we would like to know if the models/heuristics for infected/non-infected cell classification still work correctly.

Screenshot

wolny commented 4 years ago

Here's another one from the same plate (siteName: H11-0000) Screenshot from 2020-05-12 12-01-26