Control cells classified as infected - plateU1rep1_20200519_102648_382 - C01-0004

hci-unihd / antibodies-analysis-issues

Issue tracker for problems in the antibodies analysis workflow.

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Control cells classified as infected - plateU1rep1_20200519_102648_382 - C01-0004 #85

Open imagirom opened 4 years ago

imagirom commented 4 years ago

{"plateName":"plateU1rep1_20200519_102648_382","siteName":"C01-0004","pixelLocation":[1113.4482213438735,7258.662450592886,0.0],"analysisVersion":"?"}

The adaptive threshold for infected cells seems to be too low in this plate.

Screenshot

imagirom commented 4 years ago

This is probably mostly due to #88

tischi commented 4 years ago

Sorry, I am a bit red-weak. Could you next time make the marker channel magenta? 😃