tree plot error2

[xtmgah]

Hello:

I am using the plot.tree.clone.as.branch function to generate the tree. But i found there is no tree generated if the branches like this:

tree_data %>% select(lab,parent,branches) lab parent branches 1 1 13 021 2 2 14 0221 3 3 14 0222 10 10 -1 Y 5 5 16 01221 6 6 16 01222 7 7 15 0121 8 8 11 0111 9 9 11 0112 11 11 12 011 12 12 17 01 13 13 17 02 14 14 13 022 15 15 12 012 16 16 15 0122 17 17 10 0

plot.tree.clone.as.branch(tree_data,angle = 30,node.size =0,branch.text.size = 0.5,text.angle = 0,node.text.size = 1,branch.width=0.5) Error in x0[i] <- x1[which(x$branches == parent)] : replacement has length zero

Could you let me know how to fix this? ??

Here is the data frame of tree_data. tree_data.RData.zip

[hdng]

Looks like your tree has many branches. I've recently updated the tree package to handle more branches. Could you update it and see if the problem still persists?

devtools::install_github('hdng/trees')

[xtmgah]

Thanks for your reply. I try both old one and new one in your GitHub. Both is not working. The same error. If I combine branch 'Y' and '0' to a new '0', it working.

On Aug 1, 2017 at 5:36 PM, <Ha X. Dang (mailto:notifications@github.com)> wrote:

Looks like your tree has many branches. I've recently updated the tree package to handle more branches. Could you update it and see if the problem still persists?

devtools::install_github('hdng/trees')

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub (https://github.com/hdng/clonevol/issues/10#issuecomment-319504213), or mute the thread (https://github.com/notifications/unsubscribe-auth/AECjdPo7KSaZQ-twP7U0zCtwevdLct9eks5sT5pTgaJpZM4OqUU8).

[xtmgah]

So, the original node 'Y' is the outroot and '0' is first node... i guess this is the reason the code failed?

On Aug 1, 2017 at 5:36 PM, <Ha X. Dang (mailto:notifications@github.com)> wrote:

Looks like your tree has many branches. I've recently updated the tree package to handle more branches. Could you update it and see if the problem still persists?

devtools::install_github('hdng/trees')

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub (https://github.com/hdng/clonevol/issues/10#issuecomment-319504213), or mute the thread (https://github.com/notifications/unsubscribe-auth/AECjdPo7KSaZQ-twP7U0zCtwevdLct9eks5sT5pTgaJpZM4OqUU8).

[xtmgah]

Could you help to fix this? Thanks.

[xtmgah]

I just try to put the "Y" in the first row and it totally working... So i think the program default need the "Y" trunk in the first row....