Hello,
I get the following error when running infer.clonal.models().
ERROR: No clonal models for sample: .
Check data or remove this sample, then re-run.
I have got more SNVs using about 430 or 1500 SNVs as the input data.But the error stills appears.
And CNVs infect the VAF (about 7/40 SNVs with VAF closed to 1). Then how to solve this problem? I cannot remove the 7 SNVs for their importance.
But I have input the CNV results when running sciClone.
I don't know how to choose the clonal model. So I tried both of them(polyclonal and monoclonal).
But the error still appear.
I am very confused.
And hope for your reply and help.
Thank you.
Gao
Hello, I get the following error when running infer.clonal.models().
ERROR: No clonal models for sample: . Check data or remove this sample, then re-run.
I have got more SNVs using about 430 or 1500 SNVs as the input data.But the error stills appears.
And CNVs infect the VAF (about 7/40 SNVs with VAF closed to 1). Then how to solve this problem? I cannot remove the 7 SNVs for their importance. But I have input the CNV results when running sciClone.
I don't know how to choose the clonal model. So I tried both of them(polyclonal and monoclonal). But the error still appear.
I am very confused. And hope for your reply and help. Thank you. Gao