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healthdisparities / pastrami

A method for rapid sub-continental ancestry estimation.
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Threads not fully working with all subcommand #16

Open lavanyarishishwar opened 3 years ago

lavanyarishishwar commented 3 years ago

Within the all subcommand, threads seem to not being utilized with build step

lavanyarishishwar commented 3 years ago

Seems to be an issue with how pools are interacting between functions.

https://stackoverflow.com/questions/49888485/pathos-multiprocessings-pool-appears-to-be-nonlocal

Attempting to try a few other methods