docker build error

[jeremyforest]

running docker build . gives me the following error:

Sending build context to Docker daemon 4.096kB Step 1/26 : FROM nvidia/cuda:11.1.1-cudnn8-devel-ubuntu18.04 ---> 8adcfd968b3c Step 2/26 : LABEL maintainer "Chen Yang healthonrails@gmail.com" ---> Using cache ---> 7e7e02a9459c Step 3/26 : ENV DEBIAN_FRONTEND=noninteractive ---> Using cache ---> 7c5ca1e9df14 Step 4/26 : RUN apt-get update -qq && apt-get install -qq -y git wget ca-certificates python3 python3-pip python3-matplotlib python3-pyqt5 python3-opencv python3-dev sudo ninja-build ffmpeg && rm -rf /var/lib/apt/lists/* ---> Using cache ---> a22c20e197ab Step 5/26 : RUN python3 -m pip install -U pip setuptools wheel ---> Using cache ---> f7e9d7b5ff39 Step 6/26 : RUN ln -sv /usr/bin/python3 /usr/bin/python ---> Using cache ---> e87f52895675 Step 7/26 : ARG USER_ID=1000 ---> Using cache ---> 9344a5135837 Step 8/26 : RUN useradd -m --no-log-init --system --uid ${USER_ID} appuser -g sudo ---> Using cache ---> 683d0599a43a Step 9/26 : RUN echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers ---> Using cache ---> 2c6635b8af5d Step 10/26 : USER annoliduser ---> Using cache ---> 5898609d7a2c Step 11/26 : WORKDIR /home/annoliduser ---> Using cache ---> 53ba0f7242aa Step 12/26 : ENV PATH="/home/annoliduser/.local/bin:${PATH}" ---> Using cache ---> f8fb657b43e6 Step 13/26 : RUN wget https://bootstrap.pypa.io/get-pip.py && python3 get-pip.py --user && rm get-pip.py ---> Running in dea20c7cc094 unable to find user annoliduser: no matching entries in passwd file

[jeremyforest]

Replacing RUN useradd -m --no-log-init --system --uid ${USER_ID} appuser -g sudo with RUN useradd -m --no-log-init --system --uid ${USER_ID} annoliduser -g sudo solved the previous error.

Now encountering this one:

Sending build context to Docker daemon 4.096kB Step 1/26 : FROM nvidia/cuda:11.1.1-cudnn8-devel-ubuntu18.04 ---> 8adcfd968b3c Step 2/26 : LABEL maintainer "Chen Yang healthonrails@gmail.com" ---> Using cache ---> 7e7e02a9459c Step 3/26 : ENV DEBIAN_FRONTEND=noninteractive ---> Using cache ---> 7c5ca1e9df14 Step 4/26 : RUN apt-get update -qq && apt-get install -qq -y git wget ca-certificates python3 python3-pip python3-matplotlib python3-pyqt5 python3-opencv python3-dev sudo ninja-build ffmpeg && rm -rf /var/lib/apt/lists/* ---> Using cache ---> a22c20e197ab Step 5/26 : RUN python3 -m pip install -U pip setuptools wheel ---> Using cache ---> f7e9d7b5ff39 Step 6/26 : RUN ln -sv /usr/bin/python3 /usr/bin/python ---> Using cache ---> e87f52895675 Step 7/26 : ARG USER_ID=1000 ---> Using cache ---> 9344a5135837 Step 8/26 : RUN useradd -m --no-log-init --system --uid ${USER_ID} annoliduser -g sudo ---> Using cache ---> 11f40a02841d Step 9/26 : RUN echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers ---> Using cache ---> 9eb2e6c2dc06 Step 10/26 : USER annoliduser ---> Using cache ---> df7d71ab0c9e Step 11/26 : WORKDIR /home/annoliduser ---> Using cache ---> a5c61d65fb5a Step 12/26 : ENV PATH="/home/annoliduser/.local/bin:${PATH}" ---> Using cache ---> 202101906d44 Step 13/26 : RUN wget https://bootstrap.pypa.io/get-pip.py && python3 get-pip.py --user && rm get-pip.py ---> Using cache ---> e789f0a6c9ee Step 14/26 : RUN python3 -m pip install -v git+https://github.com/healthonrails/annolid.git ---> Running in d8b922b38921 Using pip 21.3.1 from /home/annoliduser/.local/lib/python3.6/site-packages/pip (python 3.6) Defaulting to user installation because normal site-packages is not writeable Collecting git+https://github.com/healthonrails/annolid.git Cloning https://github.com/healthonrails/annolid.git to /tmp/pip-req-build-miy7as0n Running command git version git version 2.17.1 Running command git clone --filter=blob:none -q https://github.com/healthonrails/annolid.git /tmp/pip-req-build-miy7as0n Running command git rev-parse HEAD b954a631c4e5b6e4ecc7e37b79c19b6e373f2b62 Resolved https://github.com/healthonrails/annolid.git to commit b954a631c4e5b6e4ecc7e37b79c19b6e373f2b62 Running command git submodule update --init --recursive -q Preparing metadata (setup.py): started Running command python setup.py egg_info Traceback (most recent call last): File "", line 1, in File "/tmp/pip-req-build-miy7as0n/setup.py", line 7, in long_description = fh.read() File "/usr/lib/python3.6/encodings/ascii.py", line 26, in decode return codecs.ascii_decode(input, self.errors)[0] UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 2665: ordinal not in range(128) Preparing metadata (setup.py): finished with status 'error' WARNING: Discarding git+https://github.com/healthonrails/annolid.git. Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output. ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output. The command '/bin/sh -c python3 -m pip install -v git+https://github.com/healthonrails/annolid.git' returned a non-zero code: 1

[jeremyforest]

Still erroring out @healthonrails Is it working on your side ?

Sending build context to Docker daemon 4.096kB Step 1/27 : FROM nvidia/cuda:11.1.1-cudnn8-devel-ubuntu18.04 ---> 8adcfd968b3c Step 2/27 : LABEL maintainer "Chen Yang healthonrails@gmail.com" ---> Using cache ---> 7e7e02a9459c Step 3/27 : ENV DEBIAN_FRONTEND=noninteractive ---> Using cache ---> 7c5ca1e9df14 Step 4/27 : RUN apt-get update -qq && apt-get install -qq -y git wget ca-certificates python3 python3-pip python3-matplotlib python3-pyqt5 python3-opencv python3-dev sudo ninja-build ffmpeg && rm -rf /var/lib/apt/lists/* ---> Using cache ---> a22c20e197ab Step 5/27 : RUN python3 -m pip install -U pip setuptools wheel ---> Using cache ---> f7e9d7b5ff39 Step 6/27 : RUN ln -sv /usr/bin/python3 /usr/bin/python ---> Using cache ---> e87f52895675 Step 7/27 : ARG USER_ID=1000 ---> Using cache ---> 9344a5135837 Step 8/27 : RUN useradd -m --no-log-init --system --uid ${USER_ID} annoliduser -g sudo ---> Using cache ---> 11f40a02841d Step 9/27 : RUN echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers ---> Using cache ---> 9eb2e6c2dc06 Step 10/27 : USER annoliduser ---> Using cache ---> df7d71ab0c9e Step 11/27 : WORKDIR /home/annoliduser ---> Using cache ---> a5c61d65fb5a Step 12/27 : ENV PATH="/home/annoliduser/.local/bin:${PATH}" ---> Using cache ---> 202101906d44 Step 13/27 : RUN wget https://bootstrap.pypa.io/get-pip.py && python3 get-pip.py --user && rm get-pip.py ---> Using cache ---> e789f0a6c9ee Step 14/27 : RUN pip install --user tensorboard cmake ---> Using cache ---> 1f0c78e8ea73 Step 15/27 : RUN pip install --user torch==1.9 torchvision==0.10 -f https://download.pytorch.org/whl/cu111/torch_stable.html ---> Using cache ---> a86d6719ca43 Step 16/27 : RUN pip install --user 'git+https://github.com/facebookresearch/fvcore' ---> Using cache ---> fe52f81762a4 Step 17/27 : RUN git clone https://github.com/facebookresearch/detectron2 detectron2_repo ---> Using cache ---> dfa0248e4926 Step 18/27 : ENV FORCE_CUDA="1" ---> Using cache ---> 593512e107de Step 19/27 : ARG TORCH_CUDA_ARCH_LIST="Kepler;Kepler+Tesla;Maxwell;Maxwell+Tegra;Pascal;Volta;Turing" ---> Using cache ---> b34f627a0759 Step 20/27 : ENV TORCH_CUDA_ARCH_LIST="${TORCH_CUDA_ARCH_LIST}" ---> Using cache ---> fbe7e4a32db6 Step 21/27 : RUN pip install --user -e detectron2_repo ---> Using cache ---> dbb9a35c1ff1 Step 22/27 : RUN git clone https://github.com/healthonrails/annolid annolid ---> Using cache ---> 2220cd1082af Step 23/27 : RUN pip install --user -e annolid ---> Running in f6aff9c3774a Obtaining file:///home/annoliduser/annolid Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'error' ERROR: Command errored out with exit status 1: command: /usr/bin/python3 -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/home/annoliduser/annolid/setup.py'"'"'; file='"'"'/home/annoliduser/annolid/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-pip-egg-info-n9r_h8hk cwd: /home/annoliduser/annolid/ Complete output (7 lines): Traceback (most recent call last): File "", line 1, in File "/home/annoliduser/annolid/setup.py", line 9, in long_description = fh.read() File "/usr/lib/python3.6/encodings/ascii.py", line 26, in decode return codecs.ascii_decode(input, self.errors)[0] UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 2665: ordinal not in range(128) WARNING: Discarding file:///home/annoliduser/annolid. Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output. ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output. The command '/bin/sh -c pip install --user -e annolid' returned a non-zero code: 1

[healthonrails]

I tried it works fine now. I removed the long description which reads the README in the setup.py file that causesd the UnicodeDecodeError.

[jeremyforest]

still hitting an error on my side due to a package requirement issue. Not sure why only on my side though ?

Sending build context to Docker daemon 4.096kB Step 1/27 : FROM nvidia/cuda:11.1.1-cudnn8-devel-ubuntu18.04 ---> 8adcfd968b3c Step 2/27 : LABEL maintainer "Chen Yang healthonrails@gmail.com" ---> Using cache ---> 7e7e02a9459c Step 3/27 : ENV DEBIAN_FRONTEND=noninteractive ---> Using cache ---> 7c5ca1e9df14 Step 4/27 : RUN apt-get update -qq && apt-get install -qq -y git wget ca-certificates python3 python3-pip python3-matplotlib python3-pyqt5 python3-opencv python3-dev sudo ninja-build ffmpeg && rm -rf /var/lib/apt/lists/* ---> Using cache ---> a22c20e197ab Step 5/27 : RUN python3 -m pip install -U pip setuptools wheel ---> Using cache ---> f7e9d7b5ff39 Step 6/27 : RUN ln -sv /usr/bin/python3 /usr/bin/python ---> Using cache ---> e87f52895675 Step 7/27 : ARG USER_ID=1000 ---> Using cache ---> 9344a5135837 Step 8/27 : RUN useradd -m --no-log-init --system --uid ${USER_ID} annoliduser -g sudo ---> Using cache ---> 11f40a02841d Step 9/27 : RUN echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers ---> Using cache ---> 9eb2e6c2dc06 Step 10/27 : USER annoliduser ---> Using cache ---> df7d71ab0c9e Step 11/27 : WORKDIR /home/annoliduser ---> Using cache ---> a5c61d65fb5a Step 12/27 : ENV PATH="/home/annoliduser/.local/bin:${PATH}" ---> Using cache ---> 202101906d44 Step 13/27 : RUN wget https://bootstrap.pypa.io/get-pip.py && python3 get-pip.py --user && rm get-pip.py ---> Using cache ---> e789f0a6c9ee Step 14/27 : RUN pip install --user tensorboard cmake ---> Using cache ---> 1f0c78e8ea73 Step 15/27 : RUN pip install --user torch==1.9 torchvision==0.10 -f https://download.pytorch.org/whl/cu111/torch_stable.html ---> Using cache ---> a86d6719ca43 Step 16/27 : RUN pip install --user 'git+https://github.com/facebookresearch/fvcore' ---> Using cache ---> fe52f81762a4 Step 17/27 : RUN git clone https://github.com/facebookresearch/detectron2 detectron2_repo ---> Using cache ---> dfa0248e4926 Step 18/27 : ENV FORCE_CUDA="1" ---> Using cache ---> 593512e107de Step 19/27 : ARG TORCH_CUDA_ARCH_LIST="Kepler;Kepler+Tesla;Maxwell;Maxwell+Tegra;Pascal;Volta;Turing" ---> Using cache ---> b34f627a0759 Step 20/27 : ENV TORCH_CUDA_ARCH_LIST="${TORCH_CUDA_ARCH_LIST}" ---> Using cache ---> fbe7e4a32db6 Step 21/27 : RUN pip install --user -e detectron2_repo ---> Using cache ---> dbb9a35c1ff1 Step 22/27 : RUN git clone --recurse-submodules https://github.com/healthonrails/annolid.git ---> Using cache ---> a71d6683ab10 Step 23/27 : RUN pip install --user -e annolid ---> Running in aae3e8532027 Obtaining file:///home/annoliduser/annolid Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting numpy>=1.18.2 Downloading numpy-1.19.5-cp36-cp36m-manylinux2010_x86_64.whl (14.8 MB) Collecting scipy>=1.5.2 Downloading scipy-1.5.4-cp36-cp36m-manylinux1_x86_64.whl (25.9 MB) Collecting easydict>=1.9 Downloading easydict-1.9.tar.gz (6.4 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting opencv-python==4.1.2.30 Downloading opencv_python-4.1.2.30-cp36-cp36m-manylinux1_x86_64.whl (28.3 MB) Collecting opencv-contrib-python==4.1.2.30 Downloading opencv_contrib_python-4.1.2.30-cp36-cp36m-manylinux1_x86_64.whl (34.3 MB) Collecting opencv-python-headless==4.1.2.30 Downloading opencv_python_headless-4.1.2.30-cp36-cp36m-manylinux1_x86_64.whl (21.8 MB) Requirement already satisfied: PyYAML>=5.3 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (6.0) Collecting labelme>=4.5.6 Downloading labelme-4.5.13.tar.gz (1.5 MB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting decord>=0.4.0 Downloading decord-0.6.0-py3-none-manylinux2010_x86_64.whl (13.6 MB) Requirement already satisfied: torch>=1.4.0 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (1.9.0+cu111) Requirement already satisfied: torchvision>=0.5.0 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (0.10.0+cu111) Collecting pandas>=1.1.3 Downloading pandas-1.1.5-cp36-cp36m-manylinux1_x86_64.whl (9.5 MB) Requirement already satisfied: pycocotools>=2.0.2 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (2.0.2) Requirement already satisfied: tensorboard>=2.3.0 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (2.7.0) Collecting imageio>=2.8.0 Downloading imageio-2.10.1-py3-none-any.whl (3.3 MB) Collecting imageio-ffmpeg>=0.4.2 Downloading imageio_ffmpeg-0.4.5-py3-none-manylinux2010_x86_64.whl (26.9 MB) Collecting PyQtWebEngine>=5.15.1 Downloading PyQtWebEngine-5.15.5-cp36-abi3-manylinux1_x86_64.whl (228 kB) ERROR: Could not find a version that satisfies the requirement simplification>=0.5.12 (from annolid) (from versions: 0.2.1, 0.2.2, 0.2.7, 0.2.8, 0.2.9, 0.2.10, 0.2.11, 0.3.2, 0.3.3, 0.3.7, 0.3.8, 0.3.9, 0.4.2, 0.4.4, 0.5.1, 0.5.2, 0.5.7) ERROR: No matching distribution found for simplification>=0.5.12 The command '/bin/sh -c pip install --user -e annolid' returned a non-zero code: 1

[healthonrails]

still hitting an error on my side due to a package requirement issue. Not sure why only on my side though ?

Sending build context to Docker daemon 4.096kB Step 1/27 : FROM nvidia/cuda:11.1.1-cudnn8-devel-ubuntu18.04 ---> 8adcfd968b3c Step 2/27 : LABEL maintainer "Chen Yang healthonrails@gmail.com" ---> Using cache ---> 7e7e02a9459c Step 3/27 : ENV DEBIAN_FRONTEND=noninteractive ---> Using cache ---> 7c5ca1e9df14 Step 4/27 : RUN apt-get update -qq && apt-get install -qq -y git wget ca-certificates python3 python3-pip python3-matplotlib python3-pyqt5 python3-opencv python3-dev sudo ninja-build ffmpeg && rm -rf /var/lib/apt/lists/* ---> Using cache ---> a22c20e197ab Step 5/27 : RUN python3 -m pip install -U pip setuptools wheel ---> Using cache ---> f7e9d7b5ff39 Step 6/27 : RUN ln -sv /usr/bin/python3 /usr/bin/python ---> Using cache ---> e87f52895675 Step 7/27 : ARG USER_ID=1000 ---> Using cache ---> 9344a5135837 Step 8/27 : RUN useradd -m --no-log-init --system --uid ${USER_ID} annoliduser -g sudo ---> Using cache ---> 11f40a02841d Step 9/27 : RUN echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers ---> Using cache ---> 9eb2e6c2dc06 Step 10/27 : USER annoliduser ---> Using cache ---> df7d71ab0c9e Step 11/27 : WORKDIR /home/annoliduser ---> Using cache ---> a5c61d65fb5a Step 12/27 : ENV PATH="/home/annoliduser/.local/bin:${PATH}" ---> Using cache ---> 202101906d44 Step 13/27 : RUN wget https://bootstrap.pypa.io/get-pip.py && python3 get-pip.py --user && rm get-pip.py ---> Using cache ---> e789f0a6c9ee Step 14/27 : RUN pip install --user tensorboard cmake ---> Using cache ---> 1f0c78e8ea73 Step 15/27 : RUN pip install --user torch==1.9 torchvision==0.10 -f https://download.pytorch.org/whl/cu111/torch_stable.html ---> Using cache ---> a86d6719ca43 Step 16/27 : RUN pip install --user 'git+https://github.com/facebookresearch/fvcore' ---> Using cache ---> fe52f81762a4 Step 17/27 : RUN git clone https://github.com/facebookresearch/detectron2 detectron2_repo ---> Using cache ---> dfa0248e4926 Step 18/27 : ENV FORCE_CUDA="1" ---> Using cache ---> 593512e107de Step 19/27 : ARG TORCH_CUDA_ARCH_LIST="Kepler;Kepler+Tesla;Maxwell;Maxwell+Tegra;Pascal;Volta;Turing" ---> Using cache ---> b34f627a0759 Step 20/27 : ENV TORCH_CUDA_ARCH_LIST="${TORCH_CUDA_ARCH_LIST}" ---> Using cache ---> fbe7e4a32db6 Step 21/27 : RUN pip install --user -e detectron2_repo ---> Using cache ---> dbb9a35c1ff1 Step 22/27 : RUN git clone --recurse-submodules https://github.com/healthonrails/annolid.git ---> Using cache ---> a71d6683ab10 Step 23/27 : RUN pip install --user -e annolid ---> Running in aae3e8532027 Obtaining file:///home/annoliduser/annolid Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting numpy>=1.18.2 Downloading numpy-1.19.5-cp36-cp36m-manylinux2010_x86_64.whl (14.8 MB) Collecting scipy>=1.5.2 Downloading scipy-1.5.4-cp36-cp36m-manylinux1_x86_64.whl (25.9 MB) Collecting easydict>=1.9 Downloading easydict-1.9.tar.gz (6.4 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting opencv-python==4.1.2.30 Downloading opencv_python-4.1.2.30-cp36-cp36m-manylinux1_x86_64.whl (28.3 MB) Collecting opencv-contrib-python==4.1.2.30 Downloading opencv_contrib_python-4.1.2.30-cp36-cp36m-manylinux1_x86_64.whl (34.3 MB) Collecting opencv-python-headless==4.1.2.30 Downloading opencv_python_headless-4.1.2.30-cp36-cp36m-manylinux1_x86_64.whl (21.8 MB) Requirement already satisfied: PyYAML>=5.3 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (6.0) Collecting labelme>=4.5.6 Downloading labelme-4.5.13.tar.gz (1.5 MB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting decord>=0.4.0 Downloading decord-0.6.0-py3-none-manylinux2010_x86_64.whl (13.6 MB) Requirement already satisfied: torch>=1.4.0 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (1.9.0+cu111) Requirement already satisfied: torchvision>=0.5.0 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (0.10.0+cu111) Collecting pandas>=1.1.3 Downloading pandas-1.1.5-cp36-cp36m-manylinux1_x86_64.whl (9.5 MB) Requirement already satisfied: pycocotools>=2.0.2 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (2.0.2) Requirement already satisfied: tensorboard>=2.3.0 in ./.local/lib/python3.6/site-packages (from annolid==1.0.1) (2.7.0) Collecting imageio>=2.8.0 Downloading imageio-2.10.1-py3-none-any.whl (3.3 MB) Collecting imageio-ffmpeg>=0.4.2 Downloading imageio_ffmpeg-0.4.5-py3-none-manylinux2010_x86_64.whl (26.9 MB) Collecting PyQtWebEngine>=5.15.1 Downloading PyQtWebEngine-5.15.5-cp36-abi3-manylinux1_x86_64.whl (228 kB) ERROR: Could not find a version that satisfies the requirement simplification>=0.5.12 (from annolid) (from versions: 0.2.1, 0.2.2, 0.2.7, 0.2.8, 0.2.9, 0.2.10, 0.2.11, 0.3.2, 0.3.3, 0.3.7, 0.3.8, 0.3.9, 0.4.2, 0.4.4, 0.5.1, 0.5.2, 0.5.7) ERROR: No matching distribution found for simplification>=0.5.12 The command '/bin/sh -c pip install --user -e annolid' returned a non-zero code: 1

I have changed the simplification to >=0.5.7 version in setup.py. Hope it will work on your platform.

[jeremyforest]

wasn't working properly because the dependency wasn't updated in requirement.txt. Updated it and updated the readme to run the docker container. Let me know if all works as expected :)

[jeremyforest]

cool ! closing this now then.