Convenience function to output what to order for the best design

heiniglab / scPower

Experimental design framework for scRNAseq population studies (eQTL and DE)

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Convenience function to output what to order for the best design #10

Closed matthiasheinig closed 2 years ago

matthiasheinig commented 2 years ago

When optimizing power for a given budget it would be nice to have a function that returns what one should order to run the experiment with the optimal design: how many illumina flowcells and 10X library prep kits?

KatharinaSchmid commented 2 years ago

Thanks for the suggestion, such a function is now added to the package (version 1.0.2), called print_optimalDesign_10X(). It takes the result data.frame from the optimization function optimize.constant.budget() as input.