number of 10X reactions per kit as a parameter

heiniglab / scPower

Experimental design framework for scRNAseq population studies (eQTL and DE)

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number of 10X reactions per kit as a parameter #11

Closed matthiasheinig closed 2 years ago

matthiasheinig commented 2 years ago

10X now sells the 4rxn kits. therefore it would be great have the number of reactions as a parameter in the functions sampleSizeBudgetCalculation and optimize.constant.budget and not always use the hard coded number of 6 rxns

KatharinaSchmid commented 2 years ago

Thanks for the suggestion, this parameter reactionsPerKit is added now to all necessary functions in the package (version 1.0.2), for example for budget calculation and optimization.