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heiniglab / scPower

Experimental design framework for scRNAseq population studies (eQTL and DE)
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suggestions #5

Open daniel-spies opened 2 years ago

daniel-spies commented 2 years ago

Hi there,

thanks for the great tool, I'd just have two suggestions:

1) in my setup I will have one condition which expands specific cell types, would it be possible to specify the number of or fraction of cell types for each condition separately?

2) input control, I read in data without paying too much attention. The foldchange was a character in the ref.study data.frame and I had to debug down to the power.de function as the error message was non-telling. So to be more user-friendly maybe check / convert input types

best Daniel

KatharinaSchmid commented 2 years ago

Hi Daniel,

thanks for the nice suggestions. I will implement them, when I find the time :)

Best, Katharina