helendallas / FRC_FBIS

Freshwater research Centre FBIS Data Consolidation Management
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SAEON SASS data #137

Closed helendallas closed 2 years ago

helendallas commented 3 years ago

SASS data received from SAEON has been entered by Kyle Middleton into FBIS. There are however some outstanding issues that need to be resolved. some sites and data are missing.

Mainstem sites =4 image

Tributaries =2 sites image

@Kyle-Mark Please check. If you are unable to do this please let @aneriswanepoel know and she can add the data, once you have shared these with us.

helendallas commented 3 years ago

As per email from @Kyle-Mark the SASS data is all captured. @aneriswanepoel Please can you run queries to check the data, thanks

aneriswanepoel commented 3 years ago

@helendallas I have gone through the SASS data that Kyle sent through, and it seems that there is still quite a bit missing from FBIS...there should be more than 8 sites (according to the spreadsheet there are 21 sites with SASS data)

image

For the sites that are on FBIS, there also seems to be data missing for a number of sampling dates.

Kyle is also still the owner of two sites: image

aneriswanepoel commented 3 years ago

@helendallas search results with Validated and Non-Validated selected:

image

aneriswanepoel commented 3 years ago

@helendallas Okay SASS data comes up when specifying TD Mohlala as owner:

image

Not sure why the data doesn't come up when searching for the study reference though..

helendallas commented 3 years ago

Thanks @aneriswanepoel Please can you email Kyle and follow up with him. I think perhaps he needs to send you the data so that we can figure out what is missing.

aneriswanepoel commented 3 years ago

@helendallas so it seems all the data is there (I've checked the spreadsheet that Kyle sent through) and the metadata is correct. So it has been entered correctly. However, if you search by Study Reference, FBIS only returns 8 sites where it should return 21 sites. But if you search by Owner as TD Mohlala, FBIS returns all 21 sites.

helendallas commented 3 years ago

@aneriswanepoel Oh dear, please can you email Dimas with links so he can check and revert. Thanks

Kyle-Mark commented 3 years ago

Hi Helen and Aneri

I also encountered that issue of it not finding the study references. It also couldn't find site codes when I searched for them but when I input the coordinates, it showed them. As for the dates that are missing from the data, this came about when I checked everything to look for possible reasons for why the SASS scored would have differed between samples. Within the data, there is a column which I missed the first time round which says whether to remove or exclude from SASS. I also removed the sampling dates where there were comments saying for example that only stones were sampled, and not vegetation or GSM. Does that make sense?

From: Aneri Swanepoel @.> Sent: Wednesday, 28 July 2021 12:52 To: helendallas/FRC_FBIS @.> Cc: Kyle-Mark @.>; Mention @.> Subject: Re: [helendallas/FRC_FBIS] SAEON SASS data (#137)

@helendallashttps://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fhelendallas&data=04%7C01%7C%7Cd856fc21f5e74bbc24f308d951b5b5ac%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637630662926978513%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=LNZX4MRVn91dALbHnb%2B9O4aVPnu1UfaSbfkq1BtVi1w%3D&reserved=0 so it seems all the data is there (I've checked the spreadsheet that Kyle sent through) and the metadata is correct. So it has been entered correctly. However, if you search by Study Reference, FBIS only returns 8 sites where it should return 21 sites. But if you search by Owner as TD Mohlala, FBIS returns all 21 sites.

- You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fhelendallas%2FFRC_FBIS%2Fissues%2F137%23issuecomment-888212968&data=04%7C01%7C%7Cd856fc21f5e74bbc24f308d951b5b5ac%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637630662926978513%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=ZY0DNHnCG%2B%2FwGjlI9WysmbOTdq4D8MdM5bhDcJIa9b0%3D&reserved=0, or unsubscribehttps://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FAPMZDXR3M54GX7WAH67LUB3TZ7OLHANCNFSM5ACN25FQ&data=04%7C01%7C%7Cd856fc21f5e74bbc24f308d951b5b5ac%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637630662926978513%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=UiML3xGVCb%2B0te3zeLuN27dpeZpuneZ5CGOzDEGAsd0%3D&reserved=0.

aneriswanepoel commented 3 years ago

Thanks @Kyle-Mark I'm going to email Dimas and see if he can figure out why the Study References aren't linked to all 21 sites

aneriswanepoel commented 3 years ago

@Kyle-Mark out of interest, do you have any further info on why so many dates had to be excluded? Or why there is an Exclude for SASS column and what determined the True/False?

helendallas commented 2 years ago

Please confirm the Source Reference of these data and Owner.

helendallas commented 2 years ago

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