Closed biochem-fan closed 8 years ago
Please let me know if I have fixed this and close the issue if so.
It still calculates CC.
Moreover, it crashes after CC grid calculation.
94% complete
96% complete
98% complete
100% complete
Generating CC grid for 10578 images
Total calculations to do: 55952331
Percentage of CCs above 0: 96.4551%
Percentage of inverse CCs above 0: 0%
Histogram:
Min CC-0.95 1910728
Min CC0 26988346
Min CC0.05 303310
Min CC0.1 481712
Min CC0.15 638823
Min CC0.2 769859
Min CC0.25 881444
Min CC0.3 970036
Min CC0.35 1046784
Min CC0.4 1109948
Min CC0.45 1165842
Min CC0.5 1218279
Min CC0.55 1270206
Min CC0.6 1325399
Min CC0.65 1388356
Min CC0.7 1467177
Min CC0.75 1574423
Min CC0.8 1721721
Min CC0.85 1969897
Min CC0.9 2457340
Min CC0.95 5139666
TRUST_INDEXING_SOLUTION is set to ON so ambiguity breaking is skipped.
Error: signal 11:
dials-upstream/build/lib/cppxfel_ext.so(_Z7handleri+0x18)[0x2b67775c8f88]
/lib64/libc.so.6[0x38ff030030]
dials-upstream/build/lib/cppxfel_ext.so(_ZN16AmbiguityBreaker12printResultsEv+0xbc)[0x2b67774c382c]
dials-upstream/build/lib/cppxfel_ext.so(_ZN16AmbiguityBreaker3runEv+0x17)[0x2b67774c5347]
dials-upstream/build/lib/cppxfel_ext.so(_ZN10MtzRefiner12initialMergeEv+0x126)[0x2b6777585a46]
dials-upstream/build/lib/cppxfel_ext.so(_ZN10MtzRefiner6refineEv+0x428)[0x2b677758f388]
dials-upstream/build/lib/cppxfel_ext.so(_ZN15InputFileParser5parseEb+0x61f)[0x2b67775575ef]
dials-upstream/build/lib/cppxfel_ext.so(_Z8new_mainiPPc+0x604)[0x2b67775ca284]
dials-upstream/build/lib/cppxfel_ext.so(_Z18runCommandLineArgsiSt6vectorISsSaISsEE+0x12d)[0x2b67775a426d]
dials-upstream/build/lib/cppxfel_ext.so(_Z14runCommandLineSs+0xc3)[0x2b67775a4393]
This saves lots of memory.