Master back to dev (#297)

[YaphetKG]

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Release/2.9.1 (#205)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Release/2.9.1

Renames SPARC datasets as SPARC instead of dbgap

• Update _version.py (#206)

• Release/2.9.2 (#209)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Release 2.9.3 (#244)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Initial Kaniko build.

• Move version file definition.

• Quote env vars.

• Update env vars.

• Update env vars.

• Update env vars.

• env var changes.

• env var changes.

• env var changes.

• env var changes.

• Update DOCKER_IMAGE var.

• Update DOCKER_IMAGE var in kaniko cmd.

• Update kaniko destination line.

• Update kaniko destination line.

• Moree variable madness.

• Programatically remove quotes from version tag.

• dug dump concepts api created and tested (#229)

• Update _version.py (#234)

• Version changes + separate build and publish.

• Semantic versioning prep.

• Add develop and master versioning and tagging.

• Ncpi index fix (#232)

• Renamed anvil to ncpi

• Update ncpi datasets catalog

• Modified script to download NCPI datasets into platform subfolders

• Updated NCPI integration dataset

• Removed unused variable

• Removed ncpi top level folder to spread results among subfolders

• Change output dir to data instead of ncpi subdir

• Moved NCPI subdirs into main data folder for ingest as per Yaphet's request

• Release/2.9.4 (#260)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Initial Kaniko build.

• Move version file definition.

• Quote env vars.

• Update env vars.

• Update env vars.

• Update env vars.

• env var changes.

• env var changes.

• env var changes.

• env var changes.

• Update DOCKER_IMAGE var.

• Update DOCKER_IMAGE var in kaniko cmd.

• Update kaniko destination line.

• Update kaniko destination line.

• Moree variable madness.

• Programatically remove quotes from version tag.

• dug dump concepts api created and tested (#229)

• Update _version.py (#234)

• Version changes + separate build and publish.

• Semantic versioning prep.

• Add develop and master versioning and tagging.

• Bump version.

• Revert version to dug format.

• Ncpi index fix (#232)

• Renamed anvil to ncpi

• Update ncpi datasets catalog

• Modified script to download NCPI datasets into platform subfolders

• Updated NCPI integration dataset

• Removed unused variable

• Removed ncpi top level folder to spread results among subfolders

• Change output dir to data instead of ncpi subdir

• Moved NCPI subdirs into main data folder for ingest as per Yaphet's request

• Add github creds env var.

• Fix version typo.

• Initial commit

• Reduce ephemeral storage limits and requests

• More parsers (#248)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• consolidate dbgap format parser in single file , adds crdc and kfdrc parsers

• adding tests

• bump version

• parser when versions of studies are > 9

• test for version

• fix long text issues, and encoding errors

• nltk initialization

• change nltk approach for sliding window

• update version

• remove cruft from merge

• Release/2.9.5 (#266)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Initial Kaniko build.

• Move version file definition.

• Quote env vars.

• Update env vars.

• Update env vars.

• Update env vars.

• env var changes.

• env var changes.

• env var changes.

• env var changes.

• Update DOCKER_IMAGE var.

• Update DOCKER_IMAGE var in kaniko cmd.

• Update kaniko destination line.

• Update kaniko destination line.

• Moree variable madness.

• Programatically remove quotes from version tag.

• dug dump concepts api created and tested (#229)

• Update _version.py (#234)

• Version changes + separate build and publish.

• Semantic versioning prep.

• Add develop and master versioning and tagging.

• Bump version.

• Revert version to dug format.

• Ncpi index fix (#232)

• Renamed anvil to ncpi

• Update ncpi datasets catalog

• Modified script to download NCPI datasets into platform subfolders

• Updated NCPI integration dataset

• Removed unused variable

• Removed ncpi top level folder to spread results among subfolders

• Change output dir to data instead of ncpi subdir

• Moved NCPI subdirs into main data folder for ingest as per Yaphet's request

• Add github creds env var.

• Fix version typo.

• Initial commit

• Reduce ephemeral storage limits and requests

• More parsers (#248)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• consolidate dbgap format parser in single file , adds crdc and kfdrc parsers

• adding tests

• bump version

• parser when versions of studies are > 9

• test for version

• fix long text issues, and encoding errors

• nltk initialization

• change nltk approach for sliding window

• Master to develop sync (#262)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Release/2.9.1 (#205)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Release/2.9.1

Renames SPARC datasets as SPARC instead of dbgap

• Update _version.py (#206)

• Release/2.9.2 (#209)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Release 2.9.3 (#244)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Initial Kaniko build.

• Move version file definition.

• Quote env vars.

• Update env vars.

• Update env vars.

• Update env vars.

• env var changes.

• env var changes.

• env var changes.

• env var changes.

• Update DOCKER_IMAGE var.

• Update DOCKER_IMAGE var in kaniko cmd.

• Update kaniko destination line.

• Update kaniko destination line.

• Moree variable madness.

• Programatically remove quotes from version tag.

• dug dump concepts api created and tested (#229)

• Update _version.py (#234)

• Version changes + separate build and publish.

• Semantic versioning prep.

• Add develop and master versioning and tagging.

• Ncpi index fix (#232)

• Renamed anvil to ncpi

• Update ncpi datasets catalog

• Modified script to download NCPI datasets into platform subfolders

• Updated NCPI integration dataset

• Removed unused variable

• Removed ncpi top level folder to spread results among subfolders

• Change output dir to data instead of ncpi subdir

• Moved NCPI subdirs into main data folder for ingest as per Yaphet's request

• Release/2.9.4 (#260)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Dev version bump (#202)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• Attribute mapping from node to dug element (#203)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• adding more config options for node extraction

• some refactoring

• Changed DbGaP to SPARC in the scicrunch parser (#204)

• Anvil (#207)

• Added updated anvil dataset catalog

• Added script for downloading all anvil data dicts

• Added current anvil data dictionaries to data folder to be used for indexing

• Anvil parser (#208)

• Release/2.8.0 (#198)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Update _version.py

• Update _version.py

updating version for final push to master

• Update factory.py

Adding more comments

• Release/v2.9.0 (#201)

• Bumping version

• support for extracting dug elements from graph (#197)

• support for extracting dug elements from graph

• adding flag for enabling dug element extraction from graph

• adding new config for node_to dug element parsing

• adding more parameters to crawler to able configuration to element extraction logic

• add tests

• add tests for crawler

• Display es scores (#199)

• Include ES scores in variable results

• Round ES score to 6

• Update _version.py (#200)

• Update _version.py

• anvil parser

• bump number of files test

• Update dbgap_parser.py

• Update anvil_dbgap_parser.py

change to AnVIL

• Update test_parsers.py

update test

• Initial Kaniko build.

• Move version file definition.

• Quote env vars.

• Update env vars.

• Update env vars.

• Update env vars.

• env var changes.

• env var changes.

• env var changes.

• env var changes.

• Update DOCKER_IMAGE var.

• Update DOCKER_IMAGE var in kaniko cmd.

• Update kaniko destination line.

• Update kaniko destination line.

• Moree variable madness. …