Optimize all steps of clustering and marker genes and de genes calculations

hemberg-lab / SC3

A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments

http://bioconductor.org/packages/SC3

GNU General Public License v3.0

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Closed wikiselev closed 8 years ago

wikiselev commented 8 years ago

Think if it's worth substituting apply() with ddply or data.table...

wikiselev commented 8 years ago

Done through reimplementation of some some functions using C++ (Rcpp package). Many thanks to @ay2sanger! See #22.