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hemberg-lab / SC3

A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
http://bioconductor.org/packages/SC3
GNU General Public License v3.0
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Cluster coverage feature #19

Closed wikiselev closed 8 years ago

wikiselev commented 8 years ago

Add a feature that will allow us to identify coverage in each cluster to help identify clusters corresponding to batches with lower/higher coverage.

wikiselev commented 8 years ago

2 features per cluster:

  1. Distribution of the number of detected genes
  2. Distribution of the number of reads
wikiselev commented 8 years ago

This is now implemented through the use of pData scater table in version 1.1.7