hemberg-lab / SC3

A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
http://bioconductor.org/packages/SC3
GNU General Public License v3.0
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Order Silhouette cluster the same way as in other panels #5

Closed wikiselev closed 8 years ago

wikiselev commented 8 years ago

At the moment the cluster ordering on the Silhouette panel is different from all other panels.

wikiselev commented 8 years ago

Implemented in the newest version 1.1.7.

Please follow the manual here: https://cdn.rawgit.com/hemberg-lab/SC3/master/vignettes/my-vignette.html

To be able to use it at the moment you need to reinstall both scater and SC3 from the GitHub: install.packages("devtools") devtools::install_github("davismcc/scater", build_vignettes = TRUE) devtools::install_github("hemberg-lab/SC3")

These features will become available on Bioconductor after the next release of Bioconductor.